Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787756.1_cds_XP_016512490.1_243
CDS Infomation

[gene=LOC107829498] [db_xref=GeneID:107829498] [protein=CLK4-associating serine/arginine rich protein-like] [protein_id=XP_016512490.1] [location=complement(join(75138..75162,75234..75389,77997..78135,78333..78463,78806..78907,79171..79380,79476..79523,79638..79747,79824..80118,81391..81466,81610..81758,81864..81902,82767..82963))] [gbkey=CDS]
Sequence

ATGTGGCACGAAGCAAGGAGATCGGAGAAGAAAGTGCATGATATGATGGACGCAGCGCGT
AAGAGAGCTCAGAGACGTGCCATCTTTCTCGCTAAACGCCGTGGCGACCCTCAGCAGTCC
ATTCAAGCCATCGGCTCTCGCTGTCGTATTTACCGTGATGACGCCCTTTATCAAGCCACC
GAGGATCAGCAGGGCCTGATACCTTGGAACGGGAAACATGACATTCTGATTGACAGATTT
GATGGTCGTGCTCTTCTTGATTTTATACGAGATTCTAGTTCCCGGCATCGTCGGGCCCCA
GAAAGAACAGAGGAAGAGGAGGAACTAGAAGAGTTTGTTAGTTTTCAGCGTTATCGGGAT
TTAATTAAGCATCGGCGTAGAGGATTTAAGGACGAAGAGGGTCTGCAACATGTTAATCAG
GAAATGGAGGCTAAGACCACTGCTCTCCTTGGCTCTGACAGACCTCAAAATTCTCTGCCT
TCGGCGAGCAAGGGGTCGTATTCCCAAGTGGCTTTCTCATATGACGGAGAGGGTAAAGAC
AATCCTCACTTTTCTGATGGTGAAGAAGATGGTGATGATGATGAGGATGATGATGAGGAG
GAAGATTTTAACAGTGATGATAGCAACGACGAAGTGATGGAGTCAATTGCCAAAGATTAT
GGAGTGAAAAGGTATGGATGGCTTGTCTACATGGACAAAAAGGCTAAGGAGGAAGAAAGG
AGGCAAAGAGAAGTAATCAAGGGAGATCCTGCAATAAGGAAGCTGAGTCGCAAAGAAAGA
CGGAAAGCTTCTCAATTAGAAAGGGAGAGGGAAAGAGAAGCAGCCCGCATTACCGGGAGC
AGAGTTCTCCATCATGATCCCTATCGCGAGTCTCGACGGAGTCCAACATACGAAGCTTAT
TCACGTTCCAGAAGGTCCAGGTCAAGGTCTCTCTCATACTCGCCTCCTCATTCAAGACGC
TATGAACGTGGAGGAAAATCTGATGATATTTACCAAGGCAAGGAGAGAGCTCCGAAAATA
GAGTATATCACTGAATTTGGTGGCGCAGACGATGAGAATGAGCCTAAATTTGAAGGATAT
TCTCCACCACCGTCTCCTCCGTCTCGAACTGATCCATTAAACCGGCCATCAGCTGGTCGT
ATTCTTGAGGCCCTTCATGTTGATCCTGCATCTGGGGTATCTCTTGATAAGGATAAGAGT
GCACAAATGTTGAAAACACCAGCAAGTGCATCCTCAGCATTATCAAAGTTAAACAAGACA
ACTAGCAGTTCAAGCCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGCGA
CTTAAGCGGATAATGAGCAAACAATTGAACAAACAAATCAAGAAAGATACAGCTGTTGAG
ATGGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTTGCAGAAACAAGCCGA
GTAAGTCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAGGCAC
CGACTTAGCCGGAGTCCTATCCGAGAAAGGAGTTCTCGTAGATACCGCTCACGGTCGCGG
ACTCGCTCTCACTCACGCTCACATTCACCGTCGCGCTCTTACTCTAGTTCACACTCGCTT
TCTCGTTCCATTTCCCGGTCTCGTTCTCCTCGGGTTAGGAGGCTATCGAGACACTGA

Peptide Sequence

PEP ID

XP_016512490.1
PEP Infomation

PREDICTED: CLK4-associating serine/arginine rich protein-like [Nicotiana tabacum]
Sequence

MWHEARRSEKKVHDMMDAARKRAQRRAIFLAKRRGDPQQSIQAIGSRCRIYRDDALYQAT
EDQQGLIPWNGKHDILIDRFDGRALLDFIRDSSSRHRRAPERTEEEEELEEFVSFQRYRD
LIKHRRRGFKDEEGLQHVNQEMEAKTTALLGSDRPQNSLPSASKGSYSQVAFSYDGEGKD
NPHFSDGEEDGDDDEDDDEEEDFNSDDSNDEVMESIAKDYGVKRYGWLVYMDKKAKEEER
RQREVIKGDPAIRKLSRKERRKASQLEREREREAARITGSRVLHHDPYRESRRSPTYEAY
SRSRRSRSRSLSYSPPHSRRYERGGKSDDIYQGKERAPKIEYITEFGGADDENEPKFEGY
SPPPSPPSRTDPLNRPSAGRILEALHVDPASGVSLDKDKSAQMLKTPASASSALSKLNKT
TSSSSLSKQQGEKKETPQERLKRIMSKQLNKQIKKDTAVEMAKKREQEKQRLEKLAETSR
VSRYRRRSRSRSYSRSPRRHRLSRSPIRERSSRRYRSRSRTRSHSRSHSPSRSYSSSHSL
SRSISRSRSPRVRRLSRH

Transcript Sequence

Gene sequence data has not been registered.